Index

  • affine transformation
  • affine matching
  • allometry
  • ambient space
  • anatomical landmark
  • ANOVA identity
  • area–perimeter ratio
  • Bayesian
  • Bayesian image analysis
  • bending energy matrix
  • bond–angle–torsion coordinates
  • Bookstein shape coordinates
  • bootstrap test
  • Box’s M test for equal covariance matrices
  • canonical variate analysis
  • centring matrix
  • centroid size
  • chimpanzee skulls
    • R data(apes)
    • size
    • two sample test
  • classical multidimensional scaling
  • coincident points
  • collinear points
  • complex angular central Gaussian distribution
  • complex Bingham distribution
  • complex Bingham quartic distribution
  • complex eigenvector
  • complex normal distribution
  • complex projective space
  • complex sum of squares and products matrix
  • complex Watson distribution
  • confluent hypergeometric function
  • cortical surfaces
    • symmetry
    • PCA
    • R data(cortical)
  • crease
  • curvature
  • cut locus
  • data examples
    • see cortical surfaces, chimpanzee skulls, DNA, electrophoretic gel images, face, fetal alcohol spectrum disorder, gorilla skulls, hand-written character recognition, human movement, Iowa towns, macaque skulls
    • microfossils, mouse vertebrae, orangutan skulls, proteins, rat skulls, sand grains, schizophrenia study, sooty mangabey skulls, standing stones, steroids. Commands to access to these datasets in R pages
  • deformable templates
  • Delaunay triangles
  • diffeomorphism
  • dimension reduction
    • backwards approach
    • forwards approach
  • discriminant analysis
  • distribution
    • complex Bingham
    • complex Bingham quartic
    • complex normal
    • complex Watson
    • Fisher–Bingham
    • Mardia–Dryden
    • offset normal
    • uniform
  • DNA
    • R data(dna.dat)
    • time series
  • EDMA
  • elastic distance
  • elastic net
  • electrophoretic gel images
    • matching
    • R data(gels)
  • Euclidean distance matrix analysis
  • Euclidean norm
  • Euclidean similarity transformations
  • exponential map
    • planar shape
  • extrinsic mean
  • extrinsic mean shape
  • Face
  • averaging
    • curvature description
  • fast bootstrap test
  • fastICA
  • fetal alcohol spectrum disorder
    • discriminant analysis
    • geometric components
  • Fisher–Bingham distribution
  • form
  • Fourier series representations
  • Fréchet mean
  • Fréchet variance
  • full generalized Procrustes analysis
  • full ordinary Procrustes analysis
  • full Procrustes coordinates
  • full Procrustes distance
    • two dimensions
  • full Procrustes fit
  • full Procrustes mean
    • two dimensions
  • full Procrustes mean shape
    • sample
  • gap prior
  • general shape
  • general shape space
  • generalized inverse
  • generalized Procrustes Analysis
  • geodesic
    • horizontal
    • size-and-shape
  • geodesic model
  • Gibbs sampler
  • Goodall’s F test
    • one sample
    • two sample
  • gorilla skulls
    • biorthogonal grids
    • finite element analysis
    • mean shape estimation
    • PCA
    • principal warp
    • R data(apes)
    • relative warp analysis
  • GPA algorithm
    • shape
    • size-and-shape
  • Green–Mardia model
  • grey-level
  • hands
  • handwritten character recognition
    • mean shape
    • partial GPA
    • PCA
    • R data(digit3)
    • reflection GPA
  • Helmert submatrix
  • Hermitian
  • high-dimensional shape space
  • high-dimensional sphere
  • horizontal geodesic
  • horizontal tangent space
  • Hotelling T2 test
    • one sample
    • two sample
  • human movement
    • R data(humanmove)
    • shape spline
  • icon
  • identity matrix
  • image warping
  • independent component analysis
  • interpolation
  • intrinsic distance
    • in shape space
    • in size-and-shape space
  • intrinsic mean
    • uniqueness
  • intrinsic mean shape
    • sample
  • inverse exponential map
    • planar shape
    • shape space
  • inverse vectorize operator
  • Iowa towns
  • isometric
  • iterative closest point algorithm
  • Karcher mean
  • Kendall shape coordinates
  • Kent’s polar pre-shape coordinates
  • Kullback–Leibler
  • landmark
    • anatomical
    • definition
    • mathematical
    • pseudo
    • scientific
    • semi-
    • Type I, II, III
  • LASSO
  • LDDMM
  • Levi-Civita connection
  • logarithmic map
  • longitudinal shape
  • macaque skulls
    • Bookstein three dimensional coordinates
    • full GPA
    • mean size-and-shape
    • intrinsic kriging
    • OPA
    • permutation test
    • R data(macaques)
  • M-estimator
  • manifold data analysis
  • manifold stability
  • MANOVA test
  • Mardia–Dryden distribution
  • mathematical landmark
  • MCMC
  • microfossils
    • allometry investigation
    • R data(shells)
    • size-and-shape
  • Miles distribution
  • minimal geodesic
  • Monte Carlo test
  • Moore–Penrose inverse
  • MOSHFIT
  • mouse vertebrae
    • allometry investigation
    • Bookstein coordinates
    • canonical variates
    • complex Bingham distribution
    • ICA
    • icon plot
    • mean
    • pairwise comparision
    • PCA
    • R data(mice)
    • shape variability
    • size-and-shape inference
    • standardization in shape space
  • multidimensional scaling
  • object data
  • object oriented data analysis
  • offset normal distribution
  • offset normal shape density
  • offset shape distributions
  • orangutan skulls
    • R data(apes)
    • size
  • orbit space
  • ordinary Procrustes analysis
  • ordinary Procrustes sum of squares
  • orthogonal matrix
  • orthogonal projection
  • over-dimensioned case
  • parallel transport
    • planar shape
  • partial generalized Procrustes analysis
  • partial ordinary Procrustes analysis
  • partial Procrustes distance
  • partial Procrustes mean shape
    • sample
  • partial warp
  • Penrose coefficient
  • permutation test
  • persistence diagram
  • persistent homology
  • perturbation model
  • phylogenetic trees
  • point distribution model
  • pre-shape
  • pre-shape space
  • pre-shape sphere
  • pre-shape tangent space
    • dimensionality
  • principal axes
  • principal coordinate analysis
  • principal geodesic mean
  • principal nested spheres
  • principal strains
  • principal warp
  • Procrustes
    • Greek mythology
  • Procrustes analysis
    • generalized
    • ordinary
  • Procrustes fit
  • Procrustes mean
    • full
    • partial
  • Procrustes residuals
  • Procrustes tangent matrix
    • properties
  • proteins
    • Bayesian inference
  • pseudo landmark
  • QR decomposition
  • QR size-and-shape coordinates
  • quaternion
  • quotient space
  • rat skulls
    • geodesic
    • growth
    • R data(rats)
    • self-similarity
    • shape change
  • re-parameterization
  • reflection shape
  • regular geodesic ball
  • relative warp
  • residual mean
  • ridge regression
  • Riemannian barycentre
  • Riemannian centre of mass
  • Riemannian curvature tensor
    • planar shape
  • Riemannian distance
    • in shape space
    • in size-and-shape space
  • rigid-body transformations
  • RMSD measures
  • rotation
  • S-estimator
  • saddlepoint approximation
  • sand grains
    • R data(sand)
    • shape variability
  • schizophrenia study
    • brain scans
    • MDS
    • principal coordinates
    • R data(schizophrenia)
    • size-and-shape
    • transformation grids
    • two sample test
  • Schmidt net
  • scientific landmark
  • sectional curvature
    • size-and-shape space
  • self-similar
  • semi-landmark
  • shape
  • shape factors
  • shape of the means
  • shape space
    • triangles
  • shape space smoothing splines
  • similarity transformations
  • simplex
  • simulation
  • singularity in shape space
  • size measure
  • size-and-shape
    • space
  • skew-symmetric matrix
  • softassign
  • sooty mangabey skulls
    • full Procrustes analysis
    • growth description
    • OPA
    • R data(sooty)
  • special orthogonal matrix
  • square root normal field
  • square root velocity function
  • squared Euclidean distance matrix
  • SRVF
  • standing stones
    • flat triangles
    • shape density
  • star-shaped objects
  • steroids
    • Bayesian inference
    • cluster analysis
    • Hilbert space
    • R data(steroids)
    • size-and-shape
  • Stiefel manifold
  • stratified manifold
  • surface shape
  • tangent coordinates
    • full Procrustes
    • inverse exponential map
    • partial Procrustes
    • Procrustes residuals
    • size-and-shape
  • tangent space
    • horizontal
    • vertical
  • topological data analysis
  • torsion
  • trees
  • triangle shape space
  • uniform distribution
  • unlabelled points
  • unrolling
  • unwrapping
  • vectorize operator
  • Veronese–Whitney embedding
  • vertical tangent space
  • warping
  • weighted Procrustes
  • Ziezold mean
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